Supporting Online Material for A Genomewide Search for Ribozymes Reveals an HDV-like Sequence in the Human CPEB3 Gene

نویسندگان

  • Kourosh Salehi-Ashtiani
  • Andrej Lupták
  • Alexander Litovchick
  • Jack W. Szostak
چکیده

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A genomewide search for ribozymes reveals an HDV-like sequence in the human CPEB3 gene.

Ribozymes are thought to have played a pivotal role in the early evolution of life, but relatively few have been identified in modern organisms. We performed an in vitro selection aimed at isolating self-cleaving RNAs from the human genome. The selection yielded several ribozymes, one of which is a conserved mammalian sequence that resides in an intron of the CPEB3 gene, which belongs to a fami...

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Secondary structure confirmation and localization of Mg2+ ions in the mammalian CPEB3 ribozyme.

Most of today's knowledge of the CPEB3 ribozyme, one of the few small self-cleaving ribozymes known to occur in humans, is based on comparative studies with the hepatitis delta virus (HDV) ribozyme, which is highly similar in cleavage mechanism and probably also in structure. Here we present detailed NMR studies of the CPEB3 ribozyme in order to verify the formation of the predicted nested doub...

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Processing and translation initiation of non-long terminal repeat retrotransposons by hepatitis delta virus (HDV)-like self-cleaving ribozymes.

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CPEB3 is Associated with Human Episodic Memory

Cytoplasmic polyadenylation element-binding (CPEB) proteins are crucial for synaptic plasticity and memory in model organisms. A highly conserved, mammalian-specific short intronic sequence within CPEB3 has been identified as a ribozyme with self-cleavage properties. In humans, the ribozyme sequence is polymorphic and harbors a single nucleotide polymorphism that influences cleavage activity of...

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تاریخ انتشار 2006